Entry Detail


General Information

Database ID:TRD02044
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tsRNA-3025a
tsRNA Type:tRF-3
Amino acid and Anticodon:AspGTC
Sequence:TTCCCCGACGGGGAGCCA
Related Target:N/A
Predicted Target:AC236972.4//ACTR2//SLC35E4//PDE4C//ANKRD11//GPS1//C5orf63//DIP2B//NDUFA8//FIGNL2
External Links:
MINTbase ID:tRF-18-YRLHR0D2
tRFdb ID:tRFdb-3025a

[1] gtRNAdb_ID:tRNA-Asp-GTC-10-1
Anticodon:AspGTC
tRNA_number:trna44
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161492992        End Site(bp): 161493006+3

[2] gtRNAdb_ID:tRNA-Asp-GTC-3-1
Anticodon:AspGTC
tRNA_number:trna144
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27551236-3        End Site(bp): 27551250

[3] gtRNAdb_ID:tRNA-Asp-GTC-2-5
Anticodon:AspGTC
tRNA_number:trna69
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161440205-3        End Site(bp): 161440219

[4] gtRNAdb_ID:tRNA-Asp-GTC-2-4
Anticodon:AspGTC
tRNA_number:trna72
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161432824-3        End Site(bp): 161432838

[5] gtRNAdb_ID:tRNA-Asp-GTC-2-3
Anticodon:AspGTC
tRNA_number:trna75
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161425414-3        End Site(bp): 161425428

[6] gtRNAdb_ID:tRNA-Asp-GTC-2-2
Anticodon:AspGTC
tRNA_number:trna78
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161418033-3        End Site(bp): 161418047

[7] gtRNAdb_ID:tRNA-Asp-GTC-2-1
Anticodon:AspGTC
tRNA_number:trna81
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161410615-3        End Site(bp): 161410629

[8] gtRNAdb_ID:tRNA-Asp-GTC-2-10
Anticodon:AspGTC
tRNA_number:trna10
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125424193-3        End Site(bp): 125424207

[9] gtRNAdb_ID:tRNA-Asp-GTC-2-9
Anticodon:AspGTC
tRNA_number:trna12
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125411891-3        End Site(bp): 125411905

[10] gtRNAdb_ID:tRNA-Asp-GTC-2-8
Anticodon:AspGTC
tRNA_number:trna4
Chromosome:12
Strand:+
Coordinate:Start Site(bp): 96429856        End Site(bp): 96429870+3

[11] gtRNAdb_ID:tRNA-Asp-GTC-2-11
Anticodon:AspGTC
tRNA_number:trna38
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 8125556-3        End Site(bp): 8125570

[12] gtRNAdb_ID:tRNA-Asp-GTC-2-6
Anticodon:AspGTC
tRNA_number:trna45
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27447510        End Site(bp): 27447524+3

[13] gtRNAdb_ID:tRNA-Asp-GTC-2-7
Anticodon:AspGTC
tRNA_number:trna48
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27471580        End Site(bp): 27471594+3

[14] gtRNAdb_ID:tRNA-Asp-GTC-1-1
Anticodon:AspGTC
tRNA_number:trna5
Chromosome:12
Strand:+
Coordinate:Start Site(bp): 98897338        End Site(bp): 98897352+3



tsRNA Association Statistics

Total Associated Disease Number:4
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D055371N/A
Disease Name:Acute Lung InjuryN/A
Category:MeSHDisease Ontology
Type:Respiratory Tract DiseasesN/A
Define:A condition of lung damage that is characterized by bilateral pulmonary infiltrates (PULMONARY EDEMA) rich in NEUTROPHILS, and in the absence of clinical HEART FAILURE. This can represent a spectrum of pulmonary lesions, endothelial and epithelial, due to numerous factors (physical, chemical, or biological).N/A
Alias:Lung Injury, AcuteN/A



Disease Association Statistics

Total Associated tsRNA Number:109
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:34811808
Disease Name:Acute Lung Injury
Tissue:N/A
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:Furthermore,in the tsRNA expression profile,the top 10 Down-Regulation tsRNAs were tsRNA-1018,tsRNA-3045b,tsRNA-5021a,tsRNA-1020,tsRNA-5002b,tsRNA-3045b,tsRNA-1026,tsRNA-5004a,tsRNA-5005b and tsRNA-1009,and the top 10 Up-Regulation tsRNAs were tsRNA-3025b,tsRNA-3025a,tsRNA-5016b,tsRNA-3042b,tsRNA-3029b,tsRNA-3028b,tsRNA-5006a,tsRNA-3027b,tsRNA-3027a,and tsRNA-5009b.
Comparision:N/A
Mechanism:N/A