Entry Detail


General Information

Database ID:TRD01959
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-39-HPDEXK7S1RNS9MI2
tsRNA Type:tRF-3
Amino acid and Anticodon:ArgCCG
Sequence:ATCAGAAGATTGAGGGTTCGAGTCCCTTCGTGGTCGCCA
Related Target:N/A
Predicted Target:LMLN2//FARP1//MAP4K3//TCEA3//GABRD//RUBCN//RCN3//SEZ6//HSD17B13//P2RX6
External Links:
MINTbase ID:tRF-39-HPDEXK7S1RNS9MI2
tRFdb ID:tRNA-Arg-CCG-1-3

[1] gtRNAdb_ID:tRNA-Arg-CCG-1-3
Anticodon:ArgCCG
tRNA_number:trna1
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3200712        End Site(bp): 3200747+3

[2] gtRNAdb_ID:tRNA-Arg-CCG-1-1
Anticodon:ArgCCG
tRNA_number:trna114
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28710729-3        End Site(bp): 28710764

[3] gtRNAdb_ID:tRNA-Arg-CCG-1-2
Anticodon:ArgCCG
tRNA_number:trna73
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28849202        End Site(bp): 28849237+3

[4] gtRNAdb_ID:tRNA-Arg-TCG-3-1
Anticodon:ArgTCG
tRNA_number:trna19
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 73031245        End Site(bp): 73031280+3



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D000077273DOID:3969
Disease Name:Thyroid Cancer, Papillarythyroid gland papillary carcinoma
Category:MeSHDisease Ontology
Type:Neoplasms//Endocrine System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:An ADENOCARCINOMA that originates from follicular cells of the THYROID GLAND and accounts for the majority of THYROID CANCER cases. Cells exhibit enlarged, oval, or elongated morphologies with clear, round, nuclei. Fusions of RET, NTRK1, TPM3, and PCM1 genes are associated with this cancer.A differentiated thyroid gland carcinoma that is characterized by the small mushroom shape of the tumor which has a stem attached to the epithelial layer and arises from the follicular cells of the thyroid gland.
Alias:Familial Nonmedullary Thyroid Cancer//Nonmedullary Thyroid Carcinoma//Papillary Carcinoma Of Thyroid//Papillary Thyroid Carcinoma//Thyroid Carcinoma, PapillaryPapillary carcinoma of the Thyroid gland



Disease Association Statistics

Total Associated tsRNA Number:61
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:PCR
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:33332661
Disease Name:Thyroid Cancer, Papillary
Tissue:N/A
Dysfunction Pattern:Up-Regulation
Validated Method:PCR//High-throughput sequencing
Description:The 10 most upregulated tRFs and tsRNAs were tRF-39-I6D3887S1RMH5MI2,tRF-21-2E489B3RB,tRF-18-JMRPFQDY,tRF-17-202L2YF,tRF-17-VBY9PYJ,tRF-18-YRRHQFD2,tRF-21-WE884U1DD,tRF-41-EX2Z10I9BZBZOS4YB,tRF-39-HPDEXK7S1RNS9MI2,and tRF-20-1SS2P46I.
Comparision:N/A
Mechanism:N/A