Entry Detail


General Information

Database ID:TRD01480
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-19-3L7L73JD
tsRNA Type:i-tRF
Amino acid and Anticodon:ValAAC;ValCAC
Sequence:CCGTAGTGTAGTGGTTATC
Related Target:N/A
Predicted Target:FUT2//CTNND2//NEFL//USP50//MUSK//VRK2//USP19//RGS8//KRTAP19-8//SGMS1
External Links:
MINTbase ID:tRF-19-3L7L73JD
tRFdb ID:tRNA-Val-AAC-5-1

[1] gtRNAdb_ID:tRNA-Val-AAC-5-1
Anticodon:ValAAC
tRNA_number:trna37
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27203292        End Site(bp): 27203310

[2] gtRNAdb_ID:tRNA-Val-AAC-4-1
Anticodon:ValAAC
tRNA_number:trna136
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27648935        End Site(bp): 27648953

[3] gtRNAdb_ID:tRNA-Val-AAC-3-1
Anticodon:ValAAC
tRNA_number:trna139
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27618757        End Site(bp): 27618775

[4] gtRNAdb_ID:tRNA-Val-AAC-1-1
Anticodon:ValAAC
tRNA_number:trna2
Chromosome:3
Strand:+
Coordinate:Start Site(bp): 169490022        End Site(bp): 169490040

[5] gtRNAdb_ID:tRNA-Val-AAC-1-4
Anticodon:ValAAC
tRNA_number:trna12
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180645320        End Site(bp): 180645338

[6] gtRNAdb_ID:tRNA-Val-AAC-1-2
Anticodon:ValAAC
tRNA_number:trna4
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180591158        End Site(bp): 180591176

[7] gtRNAdb_ID:tRNA-Val-AAC-1-3
Anticodon:ValAAC
tRNA_number:trna5
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180596614        End Site(bp): 180596632

[8] gtRNAdb_ID:tRNA-Val-AAC-1-5
Anticodon:ValAAC
tRNA_number:trna132
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27721229        End Site(bp): 27721247

[9] gtRNAdb_ID:tRNA-Val-CAC-5-1
Anticodon:ValCAC
tRNA_number:trna90
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149684139        End Site(bp): 149684157

[10] gtRNAdb_ID:tRNA-Val-CAC-4-1
Anticodon:ValCAC
tRNA_number:trna98
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149298605        End Site(bp): 149298623

[11] gtRNAdb_ID:tRNA-Val-CAC-1-1
Anticodon:ValCAC
tRNA_number:trna85
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161369540        End Site(bp): 161369558

[12] gtRNAdb_ID:tRNA-Val-CAC-1-5
Anticodon:ValCAC
tRNA_number:trna10
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180649445        End Site(bp): 180649463

[13] gtRNAdb_ID:tRNA-Val-CAC-1-3
Anticodon:ValCAC
tRNA_number:trna18
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180529303        End Site(bp): 180529321

[14] gtRNAdb_ID:tRNA-Val-CAC-1-2
Anticodon:ValCAC
tRNA_number:trna2
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180524074        End Site(bp): 180524092

[15] gtRNAdb_ID:tRNA-Val-CAC-1-4
Anticodon:ValCAC
tRNA_number:trna6
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180600654        End Site(bp): 180600672

[16] gtRNAdb_ID:tRNA-Val-CAC-1-6
Anticodon:ValCAC
tRNA_number:trna9
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26538286        End Site(bp): 26538304



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D013274 DOID:10534
Disease Name:Stomach Neoplasmsstomach cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the STOMACH.A gastrointestinal system cancer that is located_in the stomach.
Alias:Cancer of Stomach//Cancer of the Stomach//Gastric Cancer//Gastric Cancer, Familial Diffuse//Gastric Neoplasms//Neoplasms, Gastric//Neoplasms, Stomach//Stomach Cancergastric cancer//gastric neoplasm



Disease Association Statistics

Total Associated tsRNA Number:79
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR//Scratch wound healing assay//Transwell assay//Cell apoptosis assay//Cell proliferation assay//RT-PCR//Transfection//Cell cycle assay
Weak Evidence:N/A



Reference

[1] PubMed ID:33746573
Disease Name:Stomach Neoplasms
Tissue:N/A
Dysfunction Pattern:N/A
Validated Method:RT-PCR//Scratch wound healing assay//Transwell assay//Cell apoptosis assay//Cell proliferation assay//RT-PCR//Transfection//Cell cycle assay
Description:tRF-19-3L7L73JD showed lower expression in the tested gastric cancer patients.
Comparision:N/A
Mechanism:N/A