Entry Detail


General Information

Database ID:TRD01476
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:AS-tDR-005384
tsRNA Type:i-tRF
Amino acid and Anticodon:ValAAC;ValCAC
Sequence:CACGCGAAAGGTCCCCGGT
Related Target:N/A
Predicted Target:CSGALNACT1//CTBP1//LMNB1//NPAS1//APH1A//RASGRP2//TGFBRAP1//GTPBP1//GDF5OS//GET1
External Links:
MINTbase ID:tRF-19-2VO0SR1Z
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Val-AAC-5-1
Anticodon:ValAAC
tRNA_number:trna37
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27203323        End Site(bp): 27203341

[2] gtRNAdb_ID:tRNA-Val-AAC-2-1
Anticodon:ValAAC
tRNA_number:trna15
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180615435        End Site(bp): 180615453

[3] gtRNAdb_ID:tRNA-Val-AAC-1-1
Anticodon:ValAAC
tRNA_number:trna2
Chromosome:3
Strand:+
Coordinate:Start Site(bp): 169490053        End Site(bp): 169490071

[4] gtRNAdb_ID:tRNA-Val-AAC-1-4
Anticodon:ValAAC
tRNA_number:trna12
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180645289        End Site(bp): 180645307

[5] gtRNAdb_ID:tRNA-Val-AAC-1-2
Anticodon:ValAAC
tRNA_number:trna4
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180591189        End Site(bp): 180591207

[6] gtRNAdb_ID:tRNA-Val-AAC-1-3
Anticodon:ValAAC
tRNA_number:trna5
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180596645        End Site(bp): 180596663

[7] gtRNAdb_ID:tRNA-Val-AAC-1-5
Anticodon:ValAAC
tRNA_number:trna132
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27721198        End Site(bp): 27721216

[8] gtRNAdb_ID:tRNA-Val-CAC-6-1
Anticodon:ValCAC
tRNA_number:trna157
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27173886        End Site(bp): 27173904

[9] gtRNAdb_ID:tRNA-Val-CAC-4-1
Anticodon:ValCAC
tRNA_number:trna98
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149298574        End Site(bp): 149298592

[10] gtRNAdb_ID:tRNA-Val-CAC-3-1
Anticodon:ValCAC
tRNA_number:trna13
Chromosome:19
Strand:-
Coordinate:Start Site(bp): 4724666        End Site(bp): 4724684

[11] gtRNAdb_ID:tRNA-Val-CAC-2-1
Anticodon:ValCAC
tRNA_number:trna152
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27248068        End Site(bp): 27248086

[12] gtRNAdb_ID:tRNA-Val-CAC-1-1
Anticodon:ValCAC
tRNA_number:trna85
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161369509        End Site(bp): 161369527

[13] gtRNAdb_ID:tRNA-Val-CAC-1-5
Anticodon:ValCAC
tRNA_number:trna10
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180649414        End Site(bp): 180649432

[14] gtRNAdb_ID:tRNA-Val-CAC-1-3
Anticodon:ValCAC
tRNA_number:trna18
Chromosome:5
Strand:-
Coordinate:Start Site(bp): 180529272        End Site(bp): 180529290

[15] gtRNAdb_ID:tRNA-Val-CAC-1-2
Anticodon:ValCAC
tRNA_number:trna2
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180524105        End Site(bp): 180524123

[16] gtRNAdb_ID:tRNA-Val-CAC-1-4
Anticodon:ValCAC
tRNA_number:trna6
Chromosome:5
Strand:+
Coordinate:Start Site(bp): 180600685        End Site(bp): 180600703

[17] gtRNAdb_ID:tRNA-Val-CAC-1-6
Anticodon:ValCAC
tRNA_number:trna9
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26538317        End Site(bp): 26538335



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D009404N/A
Disease Name:Nephrotic SyndromeN/A
Category:MeSHDisease Ontology
Type:N/AN/A
Define:N/AN/A
Alias:Congenital nephrotic syndrome 1//Congenital nephrotic syndrome, Finnish type//Finnish congenital nephrosis//Nephrosis 1, congenital, Finnish type//Nephrotic Syndrome, Early-Onset, Type 3//Nephrotic Syndrome, Idiopathic//Nephrotic Syndrome, Type 1//Nephrotic Syndrome, Type 2//Nephrotic Syndrome, Type 3//Nphs3N/A



Disease Association Statistics

Total Associated tsRNA Number:209
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:32685525
Disease Name:Nephrotic Syndrome
Tissue:Podocyte
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing
Description:N/A
Comparision:Adriamycin-treated Group VS None
Mechanism:N/A