Entry Detail


General Information

Database ID:TRD01311
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-18-MBQ4NKDJ
tsRNA Type:i-tRF
Amino acid and Anticodon:MetCAT;ThrCGT
Sequence:CGGAAGCGTGCTGGGCCC
Related Target:N/A
Predicted Target:TBC1D5//PAFAH1B1//NRDE2//PTAFR//MAD2L2//CCL14//ASIC2//GTF3C4//APTX//ALG13
External Links:
MINTbase ID:tRF-18-MBQ4NKDJ
tRFdb ID:tRNA-iMet-CAT-2-1

[1] gtRNAdb_ID:tRNA-iMet-CAT-2-1
Anticodon:MetCAT
tRNA_number:trna61
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27745679        End Site(bp): 27745696

[2] gtRNAdb_ID:tRNA-iMet-CAT-1-1
Anticodon:MetCAT
tRNA_number:trna32
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 153643741        End Site(bp): 153643758

[3] gtRNAdb_ID:tRNA-iMet-CAT-1-8
Anticodon:MetCAT
tRNA_number:trna20
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 80452636        End Site(bp): 80452653

[4] gtRNAdb_ID:tRNA-iMet-CAT-1-7
Anticodon:MetCAT
tRNA_number:trna129
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27870310        End Site(bp): 27870327

[5] gtRNAdb_ID:tRNA-iMet-CAT-1-6
Anticodon:MetCAT
tRNA_number:trna142
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27560639        End Site(bp): 27560656

[6] gtRNAdb_ID:tRNA-iMet-CAT-1-5
Anticodon:MetCAT
tRNA_number:trna150
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27300803        End Site(bp): 27300820

[7] gtRNAdb_ID:tRNA-iMet-CAT-1-4
Anticodon:MetCAT
tRNA_number:trna169
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26330568        End Site(bp): 26330585

[8] gtRNAdb_ID:tRNA-iMet-CAT-1-3
Anticodon:MetCAT
tRNA_number:trna171
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26313391        End Site(bp): 26313408

[9] gtRNAdb_ID:tRNA-iMet-CAT-1-2
Anticodon:MetCAT
tRNA_number:trna2
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26286769        End Site(bp): 26286786

[10] gtRNAdb_ID:tRNA-Thr-CGT-6-1
Anticodon:ThrCGT
tRNA_number:trna151
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27271607        End Site(bp): 27271624



tsRNA Association Statistics

Total Associated Disease Number:3
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D013274 DOID:10534
Disease Name:Stomach Neoplasmsstomach cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the STOMACH.A gastrointestinal system cancer that is located_in the stomach.
Alias:Cancer of Stomach//Cancer of the Stomach//Gastric Cancer//Gastric Cancer, Familial Diffuse//Gastric Neoplasms//Neoplasms, Gastric//Neoplasms, Stomach//Stomach Cancergastric cancer//gastric neoplasm



Disease Association Statistics

Total Associated tsRNA Number:79
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR//Scratch wound healing assay//Transwell assay//Cell apoptosis assay//Cell proliferation assay
Weak Evidence:N/A



Reference

[1] PubMed ID:33746573
Disease Name:Stomach Neoplasms
Tissue:N/A
Dysfunction Pattern:Up-Regulation
Validated Method:RT-PCR//Scratch wound healing assay//Transwell assay//Cell apoptosis assay//Cell proliferation assay
Description:The significantly upregulated tsRNAs included tRF-18-S3M83004,tRF-31-PNR8YP9LON4VD,tRF-19-3L7L73JD,tRF-33-P4R8YP9LON4VDP,tRF-31-PER8YP9LON4VD,tRF-18-MBQ4NKDJ,and tRF-31-PIR8YP9LON4VD.
Comparision:N/A
Mechanism:N/A