Entry Detail


General Information

Database ID:TRD01146
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-18-YPSV17DJ
tsRNA Type:i-tRF
Amino acid and Anticodon:LeuCAG
Sequence:TTCAGGTCGCAGTCTCCC
Related Target:N/A
Predicted Target:TUB//SURF6//KRT72//ARID3C//MS4A1//NOL9//SLC22A7//SLC39A10//MARS2//TTYH1
External Links:
MINTbase ID:tRF-18-YPSV17DJ
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Leu-CAG-2-1
Anticodon:LeuCAG
tRNA_number:trna17
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 57333895        End Site(bp): 57333912

[2] gtRNAdb_ID:tRNA-Leu-CAG-2-2
Anticodon:LeuCAG
tRNA_number:trna26
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 57334425        End Site(bp): 57334442

[3] gtRNAdb_ID:tRNA-Leu-CAG-1-1
Anticodon:LeuCAG
tRNA_number:trna34
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161411355        End Site(bp): 161411372

[4] gtRNAdb_ID:tRNA-Leu-CAG-1-2
Anticodon:LeuCAG
tRNA_number:trna36
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161418773        End Site(bp): 161418790

[5] gtRNAdb_ID:tRNA-Leu-CAG-1-3
Anticodon:LeuCAG
tRNA_number:trna38
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161426154        End Site(bp): 161426171

[6] gtRNAdb_ID:tRNA-Leu-CAG-1-4
Anticodon:LeuCAG
tRNA_number:trna40
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161433564        End Site(bp): 161433581

[7] gtRNAdb_ID:tRNA-Leu-CAG-1-5
Anticodon:LeuCAG
tRNA_number:trna42
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161440945        End Site(bp): 161440962

[8] gtRNAdb_ID:tRNA-Leu-CAG-1-6
Anticodon:LeuCAG
tRNA_number:trna67
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161500165        End Site(bp): 161500182

[9] gtRNAdb_ID:tRNA-Leu-CAG-1-7
Anticodon:LeuCAG
tRNA_number:trna7
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26521468        End Site(bp): 26521485



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D016889DOID:0050939
Disease Name:Endometrial Neoplasmsuterine corpus endometrial carcinoma
Category:MeSHDisease Ontology
Type:Neoplasms//Urogenital Diseasesdisease of cellular proliferation//disease of anatomical entity
Define:Tumors or cancer of ENDOMETRIUM, the mucous lining of the UTERUS. These neoplasms can be benign or malignant. Their classification and grading are based on the various cell types and the percent of undifferentiated cells.A uterine corpus cancer that is derives_from the inner lining of the uterus.
Alias:Cancer of Endometrium//Cancer of the Endometrium//Carcinoma of Endometrium//Endometrial Cancer//Endometrial Carcinoma//Endometrium Cancer//Neoplasms, EndometrialN/A



Disease Association Statistics

Total Associated tsRNA Number:227
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36803014
Disease Name:Endometrial Neoplasms
Tissue:Endometrium
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing
Description:The levels of tsRNAs between EC tissues and normal endometrial tissues were compared and 173 differentially expressed tsRNAs were identified, including 80 downregulated and 93 upregulated tsRNAs (Figure 1B & C). All differentially expressed tsRNAs are listed in Supplementary Table 2.
Comparision:Cancer VS Normal
Mechanism:N/A