Entry Detail


General Information

Database ID:TRD01029
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:AS-tDR-003556
tsRNA Type:i-tRF
Amino acid and Anticodon:HisGTG
Sequence:ATCGTATAGTGGTTAGTACTCTG
Related Target:Slc44a5; Nkx2-1
Predicted Target:SHF//FAM49B//C1orf50//MAGEE2//AC098484.3//RNF111//SPINK13//CALN1//FYB1//VPS13B
External Links:
MINTbase ID:tRF-23-HWH3RXSIDP
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-His-GTG-2-1
Anticodon:HisGTG
tRNA_number:trna106
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149155871        End Site(bp): 149155893

[2] gtRNAdb_ID:tRNA-His-GTG-1-4
Anticodon:HisGTG
tRNA_number:trna111
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 147774888        End Site(bp): 147774910

[3] gtRNAdb_ID:tRNA-His-GTG-1-1
Anticodon:HisGTG
tRNA_number:trna118
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145396924        End Site(bp): 145396946

[4] gtRNAdb_ID:tRNA-His-GTG-1-2
Anticodon:HisGTG
tRNA_number:trna16
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 146544779        End Site(bp): 146544801

[5] gtRNAdb_ID:tRNA-His-GTG-1-3
Anticodon:HisGTG
tRNA_number:trna21
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147753477        End Site(bp): 147753499

[6] gtRNAdb_ID:tRNA-His-GTG-1-9
Anticodon:HisGTG
tRNA_number:trna1
Chromosome:15
Strand:+
Coordinate:Start Site(bp): 45493355        End Site(bp): 45493377

[7] gtRNAdb_ID:tRNA-His-GTG-1-8
Anticodon:HisGTG
tRNA_number:trna8
Chromosome:15
Strand:-
Coordinate:Start Site(bp): 45492654        End Site(bp): 45492676

[8] gtRNAdb_ID:tRNA-His-GTG-1-7
Anticodon:HisGTG
tRNA_number:trna9
Chromosome:15
Strand:-
Coordinate:Start Site(bp): 45490847        End Site(bp): 45490869

[9] gtRNAdb_ID:tRNA-His-GTG-1-5
Anticodon:HisGTG
tRNA_number:trna33
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27125912        End Site(bp): 27125934

[10] gtRNAdb_ID:tRNA-His-GTG-1-6
Anticodon:HisGTG
tRNA_number:trna7
Chromosome:9
Strand:-
Coordinate:Start Site(bp): 14433981        End Site(bp): 14434003



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D009404N/A
Disease Name:Nephrotic SyndromeN/A
Category:MeSHDisease Ontology
Type:N/AN/A
Define:N/AN/A
Alias:Congenital nephrotic syndrome 1//Congenital nephrotic syndrome, Finnish type//Finnish congenital nephrosis//Nephrosis 1, congenital, Finnish type//Nephrotic Syndrome, Early-Onset, Type 3//Nephrotic Syndrome, Idiopathic//Nephrotic Syndrome, Type 1//Nephrotic Syndrome, Type 2//Nephrotic Syndrome, Type 3//Nphs3N/A



Disease Association Statistics

Total Associated tsRNA Number:209
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:32685525
Disease Name:Nephrotic Syndrome
Tissue:Podocyte
Dysfunction Pattern:Down-Regulation
Validated Method:High-throughput sequencing
Description:N/A
Comparision:Adriamycin-treated Group VS None
Mechanism:N/A