Entry Detail


General Information

Database ID:TRD00964
Confidence:Low
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:chr1.trna35-GlyGCC@13.30.18_4_19|Out
tsRNA Type:i-tRF
Amino acid and Anticodon:GlyGCC
Sequence:CAGTGGTAGAATTCTCGC
Related Target:N/A
Predicted Target:FCGR2A//HSPB2//HSPB2-C11orf52//ATE1//MON2//KCNAB2//SIRT5//ELMO3//HARS//GRIN1
External Links:
MINTbase ID:tRF-18-J4S2I7DM
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Gly-CCC-6-1
Anticodon:GlyCCC
tRNA_number:trna91
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149680251        End Site(bp): 149680268

[2] gtRNAdb_ID:tRNA-Glu-TTC-9-1
Anticodon:GluTTC
tRNA_number:trna17
Chromosome:2
Strand:-
Coordinate:Start Site(bp): 204229172        End Site(bp): 204229189

[3] gtRNAdb_ID:tRNA-Gly-CCC-5-1
Anticodon:GlyCCC
tRNA_number:trna2
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 17053792        End Site(bp): 17053809

[4] gtRNAdb_ID:tRNA-Gly-CCC-1-1
Anticodon:GlyCCC
tRNA_number:trna133
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 16872475        End Site(bp): 16872492

[5] gtRNAdb_ID:tRNA-Gly-CCC-1-2
Anticodon:GlyCCC
tRNA_number:trna4
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 17188428        End Site(bp): 17188445

[6] gtRNAdb_ID:tRNA-Gly-GCC-5-1
Anticodon:GlyGCC
tRNA_number:trna18
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 70822609        End Site(bp): 70822626

[7] gtRNAdb_ID:tRNA-Gly-GCC-3-1
Anticodon:GlyGCC
tRNA_number:trna25
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 70812155        End Site(bp): 70812172

[8] gtRNAdb_ID:tRNA-Gly-GCC-2-1
Anticodon:GlyGCC
tRNA_number:trna68
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161493678        End Site(bp): 161493695

[9] gtRNAdb_ID:tRNA-Gly-GCC-2-5
Anticodon:GlyGCC
tRNA_number:trna19
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 70823422        End Site(bp): 70823439

[10] gtRNAdb_ID:tRNA-Gly-GCC-2-4
Anticodon:GlyGCC
tRNA_number:trna24
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 70812983        End Site(bp): 70813000

[11] gtRNAdb_ID:tRNA-Gly-GCC-2-6
Anticodon:GlyGCC
tRNA_number:trna5
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8029076        End Site(bp): 8029093

[12] gtRNAdb_ID:tRNA-Gly-GCC-2-2
Anticodon:GlyGCC
tRNA_number:trna19
Chromosome:2
Strand:-
Coordinate:Start Site(bp): 157257700        End Site(bp): 157257717

[13] gtRNAdb_ID:tRNA-Gly-GCC-2-3
Anticodon:GlyGCC
tRNA_number:trna128
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27870727        End Site(bp): 27870744

[14] gtRNAdb_ID:tRNA-Gly-GCC-1-1
Anticodon:GlyGCC
tRNA_number:trna35
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161413106        End Site(bp): 161413123

[15] gtRNAdb_ID:tRNA-Gly-GCC-1-2
Anticodon:GlyGCC
tRNA_number:trna37
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161420479        End Site(bp): 161420496

[16] gtRNAdb_ID:tRNA-Gly-GCC-1-3
Anticodon:GlyGCC
tRNA_number:trna39
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161427910        End Site(bp): 161427927

[17] gtRNAdb_ID:tRNA-Gly-GCC-1-4
Anticodon:GlyGCC
tRNA_number:trna41
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161435270        End Site(bp): 161435287

[18] gtRNAdb_ID:tRNA-Gly-GCC-1-5
Anticodon:GlyGCC
tRNA_number:trna2
Chromosome:21
Strand:-
Coordinate:Start Site(bp): 18827148        End Site(bp): 18827165

[19] gtRNAdb_ID:tRNA-Val-CAC-8-1
Anticodon:ValCAC
tRNA_number:trna99
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149294707        End Site(bp): 149294724



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D001943DOID:1612
Disease Name:Breast Neoplasmsbreast cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Skin and Connective Tissue Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the human BREAST.A thoracic cancer that originates in the mammary gland.
Alias:Breast Cancer//Breast Carcinoma//Breast Tumors//Cancer of Breast//Cancer of the Breast//Human Mammary Carcinoma//Malignant Neoplasm of Breast//Malignant Tumor of Breast//Mammary Cancer//Mammary Carcinoma, Human//Mammary Neoplasm, Human//Mammary Neoplasms, Human//Neoplasms, Breast//Tumors, Breastbreast tumor//malignant neoplasm of breast//malignant tumor of the breast//mammary cancer//mammary neoplasm//mammary tumor//primary breast cancer



Disease Association Statistics

Total Associated tsRNA Number:549
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:Data Mining



Reference

[1] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Up-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/White VS Normal/White
Mechanism:N/A

[2] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Down-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/Black VS Tumor/White
Mechanism:N/A