Entry Detail


General Information

Database ID:TRD00668
Confidence:Low
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:chr17.trna16-GlnTTG@15.32.18_2_12|Out
tsRNA Type:i-tRF
Amino acid and Anticodon:GlnTTG
Sequence:ATGGTTAGCACTCTGGAC
Related Target:N/A
Predicted Target:NEFL//MUC5B//MGAT4A//RAD54L//PKD1//RGSL1//DDX11//LARGE2//PCDHGB1//EHMT1
External Links:
MINTbase ID:tRF-18-I3VF4YDR
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Gln-CTG-5-1
Anticodon:GlnCTG
tRNA_number:trna42
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27263226        End Site(bp): 27263243

[2] gtRNAdb_ID:tRNA-Gln-CTG-2-1
Anticodon:GlnCTG
tRNA_number:trna146
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27515571        End Site(bp): 27515588

[3] gtRNAdb_ID:tRNA-Gln-CTG-1-4
Anticodon:GlnCTG
tRNA_number:trna7
Chromosome:15
Strand:-
Coordinate:Start Site(bp): 66161440        End Site(bp): 66161457

[4] gtRNAdb_ID:tRNA-Gln-CTG-1-5
Anticodon:GlnCTG
tRNA_number:trna3
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8023084        End Site(bp): 8023101

[5] gtRNAdb_ID:tRNA-Gln-CTG-1-1
Anticodon:GlnCTG
tRNA_number:trna1
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 18836416        End Site(bp): 18836433

[6] gtRNAdb_ID:tRNA-Gln-CTG-1-2
Anticodon:GlnCTG
tRNA_number:trna49
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27487322        End Site(bp): 27487339

[7] gtRNAdb_ID:tRNA-Gln-CTG-1-3
Anticodon:GlnCTG
tRNA_number:trna99
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28909418        End Site(bp): 28909435

[8] gtRNAdb_ID:tRNA-Gln-TTG-3-3
Anticodon:GlnTTG
tRNA_number:trna130
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27763680        End Site(bp): 27763697

[9] gtRNAdb_ID:tRNA-Gln-TTG-3-2
Anticodon:GlnTTG
tRNA_number:trna173
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26312015        End Site(bp): 26312032

[10] gtRNAdb_ID:tRNA-Gln-TTG-3-1
Anticodon:GlnTTG
tRNA_number:trna174
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26311464        End Site(bp): 26311481

[11] gtRNAdb_ID:tRNA-Gln-TTG-2-1
Anticodon:GlnTTG
tRNA_number:trna64
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28557170        End Site(bp): 28557187

[12] gtRNAdb_ID:tRNA-Gln-TTG-1-1
Anticodon:GlnTTG
tRNA_number:trna16
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 47269904        End Site(bp): 47269921



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D001943DOID:1612
Disease Name:Breast Neoplasmsbreast cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Skin and Connective Tissue Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the human BREAST.A thoracic cancer that originates in the mammary gland.
Alias:Breast Cancer//Breast Carcinoma//Breast Tumors//Cancer of Breast//Cancer of the Breast//Human Mammary Carcinoma//Malignant Neoplasm of Breast//Malignant Tumor of Breast//Mammary Cancer//Mammary Carcinoma, Human//Mammary Neoplasm, Human//Mammary Neoplasms, Human//Neoplasms, Breast//Tumors, Breastbreast tumor//malignant neoplasm of breast//malignant tumor of the breast//mammary cancer//mammary neoplasm//mammary tumor//primary breast cancer



Disease Association Statistics

Total Associated tsRNA Number:549
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:Data Mining



Reference

[1] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Up-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/White VS Normal/White
Mechanism:N/A

[2] PubMed ID:29229607
Disease Name:Breast Neoplasms
Tissue:Breast
Dysfunction Pattern:Down-Regulation
Validated Method:Data Mining
Description:N/A
Comparision:Tumor/Black VS Tumor/White
Mechanism:N/A