Entry Detail


General Information

Database ID:TRD00639
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:AS-tDR-002346
tsRNA Type:i-tRF
Amino acid and Anticodon:GlnCTG;GlnTTG
Sequence:TGAATCCAGCGATCCGAGTT
Related Target:N/A
Predicted Target:SCFD2//C1orf159//TOR3A//SLC5A2//NEURL1//PCK1//CLN5//MARVELD2//AOC3//TP53I3
External Links:
MINTbase ID:tRF-20-XEKJ5R5N
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Gln-CTG-6-1
Anticodon:GlnCTG
tRNA_number:trna131
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27759153        End Site(bp): 27759172

[2] gtRNAdb_ID:tRNA-Gln-CTG-4-1
Anticodon:GlnCTG
tRNA_number:trna112
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 147737400        End Site(bp): 147737419

[3] gtRNAdb_ID:tRNA-Gln-CTG-4-2
Anticodon:GlnCTG
tRNA_number:trna28
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 149186159        End Site(bp): 149186178

[4] gtRNAdb_ID:tRNA-Gln-CTG-3-1
Anticodon:GlnCTG
tRNA_number:trna15
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 145963338        End Site(bp): 145963357

[5] gtRNAdb_ID:tRNA-Gln-CTG-3-2
Anticodon:GlnCTG
tRNA_number:trna19
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 147505072        End Site(bp): 147505091

[6] gtRNAdb_ID:tRNA-Gln-CTG-2-1
Anticodon:GlnCTG
tRNA_number:trna146
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27515549        End Site(bp): 27515568

[7] gtRNAdb_ID:tRNA-Gln-CTG-1-4
Anticodon:GlnCTG
tRNA_number:trna7
Chromosome:15
Strand:-
Coordinate:Start Site(bp): 66161418        End Site(bp): 66161437

[8] gtRNAdb_ID:tRNA-Gln-CTG-1-5
Anticodon:GlnCTG
tRNA_number:trna3
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8023104        End Site(bp): 8023123

[9] gtRNAdb_ID:tRNA-Gln-CTG-1-1
Anticodon:GlnCTG
tRNA_number:trna1
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 18836436        End Site(bp): 18836455

[10] gtRNAdb_ID:tRNA-Gln-CTG-1-2
Anticodon:GlnCTG
tRNA_number:trna49
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27487342        End Site(bp): 27487361

[11] gtRNAdb_ID:tRNA-Gln-CTG-1-3
Anticodon:GlnCTG
tRNA_number:trna99
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28909396        End Site(bp): 28909415

[12] gtRNAdb_ID:tRNA-Gln-TTG-3-3
Anticodon:GlnTTG
tRNA_number:trna130
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27763658        End Site(bp): 27763677

[13] gtRNAdb_ID:tRNA-Gln-TTG-3-2
Anticodon:GlnTTG
tRNA_number:trna173
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26311993        End Site(bp): 26312012

[14] gtRNAdb_ID:tRNA-Gln-TTG-3-1
Anticodon:GlnTTG
tRNA_number:trna174
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 26311442        End Site(bp): 26311461

[15] gtRNAdb_ID:tRNA-Gln-TTG-1-1
Anticodon:GlnTTG
tRNA_number:trna16
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 47269924        End Site(bp): 47269943



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D009404N/A
Disease Name:Nephrotic SyndromeN/A
Category:MeSHDisease Ontology
Type:N/AN/A
Define:N/AN/A
Alias:Congenital nephrotic syndrome 1//Congenital nephrotic syndrome, Finnish type//Finnish congenital nephrosis//Nephrosis 1, congenital, Finnish type//Nephrotic Syndrome, Early-Onset, Type 3//Nephrotic Syndrome, Idiopathic//Nephrotic Syndrome, Type 1//Nephrotic Syndrome, Type 2//Nephrotic Syndrome, Type 3//Nphs3N/A



Disease Association Statistics

Total Associated tsRNA Number:209
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:32685525
Disease Name:Nephrotic Syndrome
Tissue:Podocyte
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:N/A
Comparision:Adriamycin-treated Group VS None
Mechanism:N/A