Entry Detail


General Information

Database ID:TRD00592
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-26-XIP2801MK8E
tsRNA Type:i-tRF
Amino acid and Anticodon:CysGCA
Sequence:TGACTGCAGATCAAGAGGTCCCCGGT
Related Target:N/A
Predicted Target:SHANK2//FAM135A//LRIG3//ZNF517//AK1//AL157935.2//GLI3//PRR29//RNF152//PIK3CB
External Links:
MINTbase ID:tRF-26-XIP2801MK8E
tRFdb ID:tRNA-Cys-GCA-25-1

[1] gtRNAdb_ID:tRNA-Cys-GCA-25-1
Anticodon:CysGCA
tRNA_number:trna12
Chromosome:3
Strand:-
Coordinate:Start Site(bp): 17741411        End Site(bp): 17741436

[2] gtRNAdb_ID:tRNA-Cys-GCA-24-1
Anticodon:CysGCA
tRNA_number:trna30
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 36989994        End Site(bp): 36990019

[3] gtRNAdb_ID:tRNA-Cys-GCA-23-1
Anticodon:CysGCA
tRNA_number:trna19
Chromosome:7
Strand:-
Coordinate:Start Site(bp): 149292324        End Site(bp): 149292349

[4] gtRNAdb_ID:tRNA-Cys-GCA-21-1
Anticodon:CysGCA
tRNA_number:trna14
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 149361942        End Site(bp): 149361967

[5] gtRNAdb_ID:tRNA-Cys-GCA-17-1
Anticodon:CysGCA
tRNA_number:trna16
Chromosome:7
Strand:-
Coordinate:Start Site(bp): 149388291        End Site(bp): 149388316

[6] gtRNAdb_ID:tRNA-Cys-GCA-11-1
Anticodon:CysGCA
tRNA_number:trna21
Chromosome:7
Strand:-
Coordinate:Start Site(bp): 149112248        End Site(bp): 149112273

[7] gtRNAdb_ID:tRNA-Cys-GCA-8-1
Anticodon:CysGCA
tRNA_number:trna8
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 73429706        End Site(bp): 73429731

[8] gtRNAdb_ID:tRNA-Cys-GCA-7-1
Anticodon:CysGCA
tRNA_number:trna127
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 93981853        End Site(bp): 93981878

[9] gtRNAdb_ID:tRNA-Cys-GCA-5-1
Anticodon:CysGCA
tRNA_number:trna3
Chromosome:15
Strand:+
Coordinate:Start Site(bp): 80037025        End Site(bp): 80037050

[10] gtRNAdb_ID:tRNA-Cys-GCA-2-2
Anticodon:CysGCA
tRNA_number:trna15
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 37023925        End Site(bp): 37023950

[11] gtRNAdb_ID:tRNA-Cys-GCA-2-4
Anticodon:CysGCA
tRNA_number:trna26
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 37310763        End Site(bp): 37310788

[12] gtRNAdb_ID:tRNA-Cys-GCA-2-3
Anticodon:CysGCA
tRNA_number:trna27
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 37310006        End Site(bp): 37310031

[13] gtRNAdb_ID:tRNA-Cys-GCA-2-1
Anticodon:CysGCA
tRNA_number:trna3
Chromosome:4
Strand:-
Coordinate:Start Site(bp): 124430024        End Site(bp): 124430049



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D013274 DOID:10534
Disease Name:Stomach Neoplasmsstomach cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the STOMACH.A gastrointestinal system cancer that is located_in the stomach.
Alias:Cancer of Stomach//Cancer of the Stomach//Gastric Cancer//Gastric Cancer, Familial Diffuse//Gastric Neoplasms//Neoplasms, Gastric//Neoplasms, Stomach//Stomach Cancergastric cancer//gastric neoplasm



Disease Association Statistics

Total Associated tsRNA Number:79
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR//Scratch wound healing assay//Transwell assay//Cell apoptosis assay//Cell proliferation assay
Weak Evidence:N/A



Reference

[1] PubMed ID:33746573
Disease Name:Stomach Neoplasms
Tissue:N/A
Dysfunction Pattern:Down-Regulation
Validated Method:RT-PCR//Scratch wound healing assay//Transwell assay//Cell apoptosis assay//Cell proliferation assay
Description:The significantly downregulated tsRNAs included tRF-41-YDLBRY73W0K5KKOVD,tRF-18-07QSNHD2,tRF-28-86J8WPMN1E0J,tRF-29-86V8WPMN1EJ3,tRF-31-6978WPRLXN4VE,tRF-30-MIF91SS2P46I,tRF-26-MI7O3B1NR8E,tRF-30-RRJ89O9NF5W8,tRF-26-XIP2801MK8E,and tRF-35-V0J8O9YEKPRS93,In vitro studies showed that tRF-33-P4R8YP9LON4VDP inhibited proliferation of gastric cancer cells.
Comparision:N/A
Mechanism:N/A