Entry Detail


General Information

Database ID:TRD00503
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-24-PY8HM2OSIZ
tsRNA Type:i-tRF
Amino acid and Anticodon:AspGTC
Sequence:GCCTGTCACGCGGGAGACCGGGGT
Related Target:N/A
Predicted Target:FCGR2A//CDCP1//ACTR3C//PGR//LHX8//ZNF662//SLC26A6//POLR2A//DHX40//LTBP3
External Links:
MINTbase ID:tRF-24-PY8HM2OSIZ
tRFdb ID:tRNA-Asp-GTC-4-1

[1] gtRNAdb_ID:tRNA-Asp-GTC-4-1
Anticodon:AspGTC
tRNA_number:trna6
Chromosome:9
Strand:-
Coordinate:Start Site(bp): 77518009        End Site(bp): 77518032

[2] gtRNAdb_ID:tRNA-Asp-GTC-2-5
Anticodon:AspGTC
tRNA_number:trna69
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161440224        End Site(bp): 161440247

[3] gtRNAdb_ID:tRNA-Asp-GTC-2-4
Anticodon:AspGTC
tRNA_number:trna72
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161432843        End Site(bp): 161432866

[4] gtRNAdb_ID:tRNA-Asp-GTC-2-3
Anticodon:AspGTC
tRNA_number:trna75
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161425433        End Site(bp): 161425456

[5] gtRNAdb_ID:tRNA-Asp-GTC-2-2
Anticodon:AspGTC
tRNA_number:trna78
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161418052        End Site(bp): 161418075

[6] gtRNAdb_ID:tRNA-Asp-GTC-2-1
Anticodon:AspGTC
tRNA_number:trna81
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161410634        End Site(bp): 161410657

[7] gtRNAdb_ID:tRNA-Asp-GTC-2-10
Anticodon:AspGTC
tRNA_number:trna10
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125424212        End Site(bp): 125424235

[8] gtRNAdb_ID:tRNA-Asp-GTC-2-9
Anticodon:AspGTC
tRNA_number:trna12
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125411910        End Site(bp): 125411933

[9] gtRNAdb_ID:tRNA-Asp-GTC-2-8
Anticodon:AspGTC
tRNA_number:trna4
Chromosome:12
Strand:+
Coordinate:Start Site(bp): 96429828        End Site(bp): 96429851

[10] gtRNAdb_ID:tRNA-Asp-GTC-2-11
Anticodon:AspGTC
tRNA_number:trna38
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 8125575        End Site(bp): 8125598

[11] gtRNAdb_ID:tRNA-Asp-GTC-2-6
Anticodon:AspGTC
tRNA_number:trna45
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27447482        End Site(bp): 27447505

[12] gtRNAdb_ID:tRNA-Asp-GTC-2-7
Anticodon:AspGTC
tRNA_number:trna48
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27471552        End Site(bp): 27471575

[13] gtRNAdb_ID:tRNA-Asp-GTC-1-1
Anticodon:AspGTC
tRNA_number:trna5
Chromosome:12
Strand:+
Coordinate:Start Site(bp): 98897310        End Site(bp): 98897333



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D003110 DOID:219
Disease Name:Colonic Neoplasmscolon cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the COLON.A colorectal cancer that is located_in the colon.
Alias:Cancer of Colon//Cancer of the Colon//Colon Adenocarcinoma//Colon Cancer//Colon Neoplasms//Colonic Cancer//Neoplasms, ColonicN/A



Disease Association Statistics

Total Associated tsRNA Number:91
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing//Data Mining



Reference

[1] PubMed ID:31173257
Disease Name:Colonic Neoplasms
Tissue:N/A
Dysfunction Pattern:Differential Express
Validated Method:High-throughput sequencing//Data Mining
Description:In total,16 DE tRFs,26 DE miRNAs,and 5,327 DE mRNAs were identified.
Comparision:N/A
Mechanism:N/A