Entry Detail


General Information

Database ID:TRD00495
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-21-R959KUMKB
tsRNA Type:i-tRF
Amino acid and Anticodon:AspGTC
Sequence:GGTTCGATTCCCCGACGGGGA
Related Target:N/A
Predicted Target:INPP5E//ITPK1//GRIK5//CNOT8//ATXN1//STAU2//SARS2//AC011455.2//KLF9//ZC3H3
External Links:
MINTbase ID:tRF-21-R959KUMKB
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Asp-GTC-3-1
Anticodon:AspGTC
tRNA_number:trna144
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27551237        End Site(bp): 27551257

[2] gtRNAdb_ID:tRNA-Asp-GTC-2-5
Anticodon:AspGTC
tRNA_number:trna69
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161440206        End Site(bp): 161440226

[3] gtRNAdb_ID:tRNA-Asp-GTC-2-4
Anticodon:AspGTC
tRNA_number:trna72
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161432825        End Site(bp): 161432845

[4] gtRNAdb_ID:tRNA-Asp-GTC-2-3
Anticodon:AspGTC
tRNA_number:trna75
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161425415        End Site(bp): 161425435

[5] gtRNAdb_ID:tRNA-Asp-GTC-2-2
Anticodon:AspGTC
tRNA_number:trna78
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161418034        End Site(bp): 161418054

[6] gtRNAdb_ID:tRNA-Asp-GTC-2-1
Anticodon:AspGTC
tRNA_number:trna81
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161410616        End Site(bp): 161410636

[7] gtRNAdb_ID:tRNA-Asp-GTC-2-10
Anticodon:AspGTC
tRNA_number:trna10
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125424194        End Site(bp): 125424214

[8] gtRNAdb_ID:tRNA-Asp-GTC-2-9
Anticodon:AspGTC
tRNA_number:trna12
Chromosome:12
Strand:-
Coordinate:Start Site(bp): 125411892        End Site(bp): 125411912

[9] gtRNAdb_ID:tRNA-Asp-GTC-2-8
Anticodon:AspGTC
tRNA_number:trna4
Chromosome:12
Strand:+
Coordinate:Start Site(bp): 96429849        End Site(bp): 96429869

[10] gtRNAdb_ID:tRNA-Asp-GTC-2-11
Anticodon:AspGTC
tRNA_number:trna38
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 8125557        End Site(bp): 8125577

[11] gtRNAdb_ID:tRNA-Asp-GTC-2-6
Anticodon:AspGTC
tRNA_number:trna45
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27447503        End Site(bp): 27447523

[12] gtRNAdb_ID:tRNA-Asp-GTC-2-7
Anticodon:AspGTC
tRNA_number:trna48
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 27471573        End Site(bp): 27471593



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D016889DOID:0050939
Disease Name:Endometrial Neoplasmsuterine corpus endometrial carcinoma
Category:MeSHDisease Ontology
Type:Neoplasms//Urogenital Diseasesdisease of cellular proliferation//disease of anatomical entity
Define:Tumors or cancer of ENDOMETRIUM, the mucous lining of the UTERUS. These neoplasms can be benign or malignant. Their classification and grading are based on the various cell types and the percent of undifferentiated cells.A uterine corpus cancer that is derives_from the inner lining of the uterus.
Alias:Cancer of Endometrium//Cancer of the Endometrium//Carcinoma of Endometrium//Endometrial Cancer//Endometrial Carcinoma//Endometrium Cancer//Neoplasms, EndometrialN/A



Disease Association Statistics

Total Associated tsRNA Number:227
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:36803014
Disease Name:Endometrial Neoplasms
Tissue:Endometrium
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:The levels of tsRNAs between EC tissues and normal endometrial tissues were compared and 173 differentially expressed tsRNAs were identified, including 80 downregulated and 93 upregulated tsRNAs (Figure 1B & C). All differentially expressed tsRNAs are listed in Supplementary Table 2.
Comparision:Cancer VS Normal
Mechanism:N/A