Entry Detail


General Information

Database ID:TRD00462
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-25-6YYDLBRY73
tsRNA Type:i-tRF
Amino acid and Anticodon:AsnGTT
Sequence:GGCTGTTAACCGAAAGGTTGGTGGT
Related Target:N/A
Predicted Target:PDE4DIP//ESPN//PI4KB//TRPM7//KPNA6//IFIT3//CACNG8//DOCK2//PTPN18//NRBP1
External Links:
MINTbase ID:tRF-25-6YYDLBRY73
tRFdb ID:tRNA-Asn-GTT-6-1

[1] gtRNAdb_ID:tRNA-Asn-GTT-6-1
Anticodon:AsnGTT
tRNA_number:trna103
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 149230589        End Site(bp): 149230613

[2] gtRNAdb_ID:tRNA-Asn-GTT-3-2
Anticodon:AsnGTT
tRNA_number:trna107
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148760375        End Site(bp): 148760399

[3] gtRNAdb_ID:tRNA-Asn-GTT-3-1
Anticodon:AsnGTT
tRNA_number:trna108
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 148598333        End Site(bp): 148598357

[4] gtRNAdb_ID:tRNA-Asn-GTT-2-1
Anticodon:AsnGTT
tRNA_number:trna26
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 148248145        End Site(bp): 148248169

[5] gtRNAdb_ID:tRNA-Asn-GTT-2-2
Anticodon:AsnGTT
tRNA_number:trna83
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161397886        End Site(bp): 161397910

[6] gtRNAdb_ID:tRNA-Asn-GTT-2-3
Anticodon:AsnGTT
tRNA_number:trna4
Chromosome:10
Strand:-
Coordinate:Start Site(bp): 22518457        End Site(bp): 22518481

[7] gtRNAdb_ID:tRNA-Asn-GTT-2-4
Anticodon:AsnGTT
tRNA_number:trna7
Chromosome:13
Strand:-
Coordinate:Start Site(bp): 31248120        End Site(bp): 31248144

[8] gtRNAdb_ID:tRNA-Asn-GTT-2-5
Anticodon:AsnGTT
tRNA_number:trna31
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 36908053        End Site(bp): 36908077

[9] gtRNAdb_ID:tRNA-Asn-GTT-2-6
Anticodon:AsnGTT
tRNA_number:trna1
Chromosome:19
Strand:+
Coordinate:Start Site(bp): 1383592        End Site(bp): 1383616

[10] gtRNAdb_ID:tRNA-Asn-GTT-1-1
Anticodon:AsnGTT
tRNA_number:trna47
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161510061        End Site(bp): 161510085



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D003110 DOID:219
Disease Name:Colonic Neoplasmscolon cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the COLON.A colorectal cancer that is located_in the colon.
Alias:Cancer of Colon//Cancer of the Colon//Colon Adenocarcinoma//Colon Cancer//Colon Neoplasms//Colonic Cancer//Neoplasms, ColonicN/A



Disease Association Statistics

Total Associated tsRNA Number:91
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing//Data Mining



Reference

[1] PubMed ID:31173257
Disease Name:Colonic Neoplasms
Tissue:N/A
Dysfunction Pattern:Differential Express
Validated Method:High-throughput sequencing//Data Mining
Description:In total,16 DE tRFs,26 DE miRNAs,and 5,327 DE mRNAs were identified.
Comparision:N/A
Mechanism:N/A