Entry Detail


General Information

Database ID:TRD00435
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-25-P940KK5Y93
tsRNA Type:i-tRF
Amino acid and Anticodon:ArgCCT
Sequence:GCCTCCTAAGCCAGGGATTGTGGGT
Related Target:N/A
Predicted Target:C1orf167//SMAGP//GMPPA//XKR6//MYBL1//ERGIC1//C10orf82//PLLP//GPRASP1//GON4L
External Links:
MINTbase ID:tRF-25-P940KK5Y93
tRFdb ID:tRNA-Arg-CCT-5-1

[1] gtRNAdb_ID:tRNA-Arg-CCT-5-1
Anticodon:ArgCCT
tRNA_number:trna12
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3243947        End Site(bp): 3243971

[2] gtRNAdb_ID:tRNA-Arg-CCT-4-1
Anticodon:ArgCCT
tRNA_number:trna3
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 139025475        End Site(bp): 139025499

[3] gtRNAdb_ID:tRNA-Arg-CCT-3-1
Anticodon:ArgCCT
tRNA_number:trna2
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3202930        End Site(bp): 3202954

[4] gtRNAdb_ID:tRNA-Arg-CCT-2-1
Anticodon:ArgCCT
tRNA_number:trna21
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 73030545        End Site(bp): 73030569

[5] gtRNAdb_ID:tRNA-Arg-CCT-1-1
Anticodon:ArgCCT
tRNA_number:trna18
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 73030030        End Site(bp): 73030054



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D003110 DOID:219
Disease Name:Colonic Neoplasmscolon cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the COLON.A colorectal cancer that is located_in the colon.
Alias:Cancer of Colon//Cancer of the Colon//Colon Adenocarcinoma//Colon Cancer//Colon Neoplasms//Colonic Cancer//Neoplasms, ColonicN/A



Disease Association Statistics

Total Associated tsRNA Number:91
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing//Data Mining



Reference

[1] PubMed ID:31173257
Disease Name:Colonic Neoplasms
Tissue:N/A
Dysfunction Pattern:Differential Express
Validated Method:High-throughput sequencing//Data Mining
Description:In total,16 DE tRFs,26 DE miRNAs,and 5,327 DE mRNAs were identified.
Comparision:N/A
Mechanism:N/A