Entry Detail


General Information

Database ID:TRD00432
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-20-40KK5Y93
tsRNA Type:i-tRF
Amino acid and Anticodon:ArgCCT
Sequence:CTAAGCCAGGGATTGTGGGT
Related Target:N/A
Predicted Target:ARNT2//RAB37//RIMS3//ERGIC1//GMPPA//MYO1G//ACSS1//TCP11L1//C10orf82//FLNA
External Links:
MINTbase ID:tRF-20-40KK5Y93
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Arg-CCT-5-1
Anticodon:ArgCCT
tRNA_number:trna12
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3243952        End Site(bp): 3243971

[2] gtRNAdb_ID:tRNA-Arg-CCT-4-1
Anticodon:ArgCCT
tRNA_number:trna3
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 139025480        End Site(bp): 139025499

[3] gtRNAdb_ID:tRNA-Arg-CCT-3-1
Anticodon:ArgCCT
tRNA_number:trna2
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3202935        End Site(bp): 3202954

[4] gtRNAdb_ID:tRNA-Arg-CCT-2-1
Anticodon:ArgCCT
tRNA_number:trna21
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 73030545        End Site(bp): 73030564

[5] gtRNAdb_ID:tRNA-Arg-CCT-1-1
Anticodon:ArgCCT
tRNA_number:trna18
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 73030035        End Site(bp): 73030054



tsRNA Association Statistics

Total Associated Disease Number:14
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D001943DOID:1612
Disease Name:Breast Neoplasmsbreast cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Skin and Connective Tissue Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the human BREAST.A thoracic cancer that originates in the mammary gland.
Alias:Breast Cancer//Breast Carcinoma//Breast Tumors//Cancer of Breast//Cancer of the Breast//Human Mammary Carcinoma//Malignant Neoplasm of Breast//Malignant Tumor of Breast//Mammary Cancer//Mammary Carcinoma, Human//Mammary Neoplasm, Human//Mammary Neoplasms, Human//Neoplasms, Breast//Tumors, Breastbreast tumor//malignant neoplasm of breast//malignant tumor of the breast//mammary cancer//mammary neoplasm//mammary tumor//primary breast cancer



Disease Association Statistics

Total Associated tsRNA Number:549
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:31929727
Disease Name:Breast Neoplasms
Tissue:Breast Cancer
Dysfunction Pattern:Down-Regulation
Validated Method:RT-PCR//High-throughput sequencing
Description:N/A
Comparision:Tumor VS Normal
Mechanism:Our studies have demonstrated that there were significantly expressed tRNA-derived fragments in breast cancer tissues. They are hopefully to become biomarkers and would be valuable researches in this area.