Entry Detail


General Information

Database ID:TRD00413
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-20-MEJB5Y13
tsRNA Type:i-tRF
Amino acid and Anticodon:ArgCCG;ArgTCG
Sequence:CGGATCAGAAGATTGAGGGT
Related Target:Dicer1
Predicted Target:FKRP//SARM1//CDK9//SZT2//NTNG2//OR10Z1//NELFA//VWCE//TP53INP2//RAB29
External Links:
MINTbase ID:tRF-20-MEJB5Y13
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Arg-CCG-1-3
Anticodon:ArgCCG
tRNA_number:trna1
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 3200709        End Site(bp): 3200728

[2] gtRNAdb_ID:tRNA-Arg-CCG-1-1
Anticodon:ArgCCG
tRNA_number:trna114
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28710748        End Site(bp): 28710767

[3] gtRNAdb_ID:tRNA-Arg-CCG-1-2
Anticodon:ArgCCG
tRNA_number:trna73
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28849199        End Site(bp): 28849218

[4] gtRNAdb_ID:tRNA-Arg-TCG-5-1
Anticodon:ArgTCG
tRNA_number:trna124
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28510910        End Site(bp): 28510929

[5] gtRNAdb_ID:tRNA-Arg-TCG-4-1
Anticodon:ArgTCG
tRNA_number:trna3
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26299939        End Site(bp): 26299958

[6] gtRNAdb_ID:tRNA-Arg-TCG-3-1
Anticodon:ArgTCG
tRNA_number:trna19
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 73031242        End Site(bp): 73031261

[7] gtRNAdb_ID:tRNA-Arg-TCG-2-1
Anticodon:ArgTCG
tRNA_number:trna4
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 26323080        End Site(bp): 26323099



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D015179DOID:9256
Disease Name:Colorectal Neoplasmscolorectal cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the COLON or the RECTUM or both. Risk factors for colorectal cancer include chronic ULCERATIVE COLITIS; FAMILIAL POLYPOSIS COLI; exposure to ASBESTOS; and irradiation of the CERVIX UTERI.A large intestine cancer that is located_in the colon and/or located_in the rectum.
Alias:Colorectal Cancer//Colorectal Carcinoma//Colorectal Tumors//Neoplasms, ColorectalN/A



Disease Association Statistics

Total Associated tsRNA Number:195
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:33763118
Disease Name:Colorectal Neoplasms
Tissue:Serum
Dysfunction Pattern:Up-Regulation
Validated Method:RT-PCR//High-throughput sequencing
Description:N/A
Comparision:Cancer VS Normal
Mechanism:tRF-20-MEJB5Y13 was increased under hypoxic conditions, and its upregulation by Dicer1 resulted in hypoxia-induced CRC cell invasion and migration.