Entry Detail


General Information

Database ID:TRD00393
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-16-9L5HMVE
tsRNA Type:i-tRF
Amino acid and Anticodon:AlaAGC
Sequence:TGGTAGAGCGCGTGCT
Related Target:N/A
Predicted Target:CDH11//PRSS36//TTYH2//OR5M9//AP002512.3//CHST13//IFFO1//PABPC3//FAM171A2//SND1
External Links:
MINTbase ID:tRF-16-9L5HMVE
tRFdb ID:tRNA-Ala-AGC-7-1

[1] gtRNAdb_ID:tRNA-Ala-AGC-7-1
Anticodon:AlaAGC
tRNA_number:trna68
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28687496        End Site(bp): 28687511

[2] gtRNAdb_ID:tRNA-Ala-AGC-5-1
Anticodon:AlaAGC
tRNA_number:trna67
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28678381        End Site(bp): 28678396

[3] gtRNAdb_ID:tRNA-Ala-AGC-3-1
Anticodon:AlaAGC
tRNA_number:trna65
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28574948        End Site(bp): 28574963

[4] gtRNAdb_ID:tRNA-Ala-AGC-2-2
Anticodon:AlaAGC
tRNA_number:trna101
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28831503        End Site(bp): 28831518

[5] gtRNAdb_ID:tRNA-Ala-AGC-2-1
Anticodon:AlaAGC
tRNA_number:trna102
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28806262        End Site(bp): 28806277

[6] gtRNAdb_ID:tRNA-Ala-AGC-1-1
Anticodon:AlaAGC
tRNA_number:trna108
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 28763782        End Site(bp): 28763797

[7] gtRNAdb_ID:tRNA-Ala-CGC-4-1
Anticodon:AlaCGC
tRNA_number:trna70
Chromosome:6
Strand:+
Coordinate:Start Site(bp): 28697107        End Site(bp): 28697122



tsRNA Association Statistics

Total Associated Disease Number:2
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D003110 DOID:219
Disease Name:Colonic Neoplasmscolon cancer
Category:MeSHDisease Ontology
Type:Neoplasms//Digestive System Diseasesdisease of anatomical entity//disease of cellular proliferation
Define:Tumors or cancer of the COLON.A colorectal cancer that is located_in the colon.
Alias:Cancer of Colon//Cancer of the Colon//Colon Adenocarcinoma//Colon Cancer//Colon Neoplasms//Colonic Cancer//Neoplasms, ColonicN/A



Disease Association Statistics

Total Associated tsRNA Number:91
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing//Data Mining



Reference

[1] PubMed ID:31173257
Disease Name:Colonic Neoplasms
Tissue:N/A
Dysfunction Pattern:Differential Express
Validated Method:High-throughput sequencing//Data Mining
Description:In total,16 DE tRFs,26 DE miRNAs,and 5,327 DE mRNAs were identified.
Comparision:N/A
Mechanism:N/A