Entry Detail


General Information

Database ID:TRD00195
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tiRNA-Gly-TCC-001
tsRNA Type:5'-tiRNA
Amino acid and Anticodon:GlyTCC
Sequence:GCGTTGGTGGTATAGTGGTGAGCATAGCTGCCTT
Related Target:N/A
Predicted Target:PHGDH//SYNPO2L//SUPT6H//RPS6KA4//FAM205A//FAM92B//CPHXL//TMEM184B//FAT4//ARMCX2
External Links:
MINTbase ID:tRF-34-QNR8VP94FQFY1Q
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Gly-TCC-2-1
Anticodon:GlyTCC
tRNA_number:trna117
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 145397902        End Site(bp): 145397935

[2] gtRNAdb_ID:tRNA-Gly-TCC-2-6
Anticodon:GlyTCC
tRNA_number:trna45
Chromosome:1
Strand:+
Coordinate:Start Site(bp): 161500903        End Site(bp): 161500936

[3] gtRNAdb_ID:tRNA-Gly-TCC-2-5
Anticodon:GlyTCC
tRNA_number:trna70
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161439585        End Site(bp): 161439618

[4] gtRNAdb_ID:tRNA-Gly-TCC-2-4
Anticodon:GlyTCC
tRNA_number:trna73
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161432204        End Site(bp): 161432237

[5] gtRNAdb_ID:tRNA-Gly-TCC-2-3
Anticodon:GlyTCC
tRNA_number:trna76
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161424794        End Site(bp): 161424827

[6] gtRNAdb_ID:tRNA-Gly-TCC-2-2
Anticodon:GlyTCC
tRNA_number:trna79
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161417413        End Site(bp): 161417446



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D017719N/A
Disease Name:Diabetic FootN/A
Category:MeSHDisease Ontology
Type:Cardiovascular Diseases//Skin and Connective Tissue Diseases//Endocrine System DiseasesN/A
Define:Common foot problems in persons with DIABETES MELLITUS, caused by any combination of factors such as DIABETIC NEUROPATHIES; PERIPHERAL VASCULAR DISEASES; and INFECTION. With the loss of sensation and poor circulation, injuries and infections often lead to severe foot ulceration, GANGRENE and AMPUTATION, SURGICAL.N/A
Alias:Diabetic Feet//Foot Ulcer, DiabeticN/A



Disease Association Statistics

Total Associated tsRNA Number:277
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing//Data Mining



Reference

[1] PubMed ID:34657473
Disease Name:Diabetic Foot
Tissue:Skin
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing//Data Mining
Description:In addition, 244 tsRNAs were confirmed to be dysregulated in DFU tissues: 178 tsRNAs were upregulated, whereas 66 tsRNAs were downregulated (DFU vs normal; FC >1.5 and p < 0.05; Figure 2D & Supplementary data 32).
Comparision:DFU VS Normal
Mechanism:N/A