Entry Detail


General Information

Database ID:TRD00180
Confidence:High
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tiRNA-Gly-GCC-003
tsRNA Type:5'-tiRNA
Amino acid and Anticodon:GlyGCC
Sequence:GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG
Related Target:Ntrk3; Ifi204
Predicted Target:FCGR2A//DPF1//ABLIM2//LPAR1//COL6A5//ERAS//SLC26A6//ST3GAL2//ZNF26//CACNA1E
External Links:
MINTbase ID:tRF-33-PNR8YP9LON4VDP
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Gly-GCC-5-1
Anticodon:GlyGCC
tRNA_number:trna18
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 70822597        End Site(bp): 70822629

[2] gtRNAdb_ID:tRNA-Gly-GCC-3-1
Anticodon:GlyGCC
tRNA_number:trna25
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 70812152        End Site(bp): 70812184

[3] gtRNAdb_ID:tRNA-Gly-GCC-2-1
Anticodon:GlyGCC
tRNA_number:trna68
Chromosome:1
Strand:-
Coordinate:Start Site(bp): 161493675        End Site(bp): 161493707

[4] gtRNAdb_ID:tRNA-Gly-GCC-2-5
Anticodon:GlyGCC
tRNA_number:trna19
Chromosome:16
Strand:+
Coordinate:Start Site(bp): 70823410        End Site(bp): 70823442

[5] gtRNAdb_ID:tRNA-Gly-GCC-2-4
Anticodon:GlyGCC
tRNA_number:trna24
Chromosome:16
Strand:-
Coordinate:Start Site(bp): 70812980        End Site(bp): 70813012

[6] gtRNAdb_ID:tRNA-Gly-GCC-2-6
Anticodon:GlyGCC
tRNA_number:trna5
Chromosome:17
Strand:+
Coordinate:Start Site(bp): 8029064        End Site(bp): 8029096

[7] gtRNAdb_ID:tRNA-Gly-GCC-2-2
Anticodon:GlyGCC
tRNA_number:trna19
Chromosome:2
Strand:-
Coordinate:Start Site(bp): 157257697        End Site(bp): 157257729

[8] gtRNAdb_ID:tRNA-Gly-GCC-2-3
Anticodon:GlyGCC
tRNA_number:trna128
Chromosome:6
Strand:-
Coordinate:Start Site(bp): 27870724        End Site(bp): 27870756



tsRNA Association Statistics

Total Associated Disease Number:10
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D015427N/A
Disease Name:Reperfusion InjuryN/A
Category:MeSHDisease Ontology
Type:Cardiovascular Diseases//Pathological Conditions, Signs and SymptomsN/A
Define:Adverse functional, metabolic, or structural changes in tissues that result from the restoration of blood flow to the tissue (REPERFUSION) following ISCHEMIA.N/A
Alias:Injury, Ischemia-Reperfusion//Injury, Reperfusion//Ischemia-Reperfusion Injury//Reperfusion DamageN/A



Disease Association Statistics

Total Associated tsRNA Number:25
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:RT-PCR
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:35546262
Disease Name:Reperfusion Injury
Tissue:Kidney
Dysfunction Pattern:Up-Regulation
Validated Method:RT-PCR//High-throughput sequencing
Description:Role of tRNA derived fragments in renal ischemia-reperfusion injury.
Comparision:IRI VS Control
Mechanism:N/A