Entry Detail


General Information

Database ID:TRD00088
Confidence:Median
Contents:>> tsRNA Information
>> tsRNA Association Statistics
>> Disease Information
>> Disease Association Statistics
>> Evidence Support
>> Reference



tsRNA Information

tsRNA Name:tRF-32-RKVP4PRL5FZU3
tsRNA Type:5'-tiRNA
Amino acid and Anticodon:CysGCA
Sequence:GGGGGTATAGCTCAGGGGTAGAGCATTTGACT
Related Target:N/A
Predicted Target:FAM189B//COL2A1//GSX1//NTNG1//IBTK//ARID1B//MTMR11//SLC22A1//PLEKHA4//CYTH4
External Links:
MINTbase ID:tRF-32-RKVP4PRL5FZU3
tRFdb ID:N/A

[1] gtRNAdb_ID:tRNA-Cys-GCA-19-1
Anticodon:CysGCA
tRNA_number:trna18
Chromosome:7
Strand:-
Coordinate:Start Site(bp): 149310196        End Site(bp): 149310227

[2] gtRNAdb_ID:tRNA-Cys-GCA-15-1
Anticodon:CysGCA
tRNA_number:trna10
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 149281816        End Site(bp): 149281847

[3] gtRNAdb_ID:tRNA-Cys-GCA-14-1
Anticodon:CysGCA
tRNA_number:trna29
Chromosome:17
Strand:-
Coordinate:Start Site(bp): 37017977        End Site(bp): 37018008

[4] gtRNAdb_ID:tRNA-Cys-GCA-13-1
Anticodon:CysGCA
tRNA_number:trna25
Chromosome:7
Strand:-
Coordinate:Start Site(bp): 149052806        End Site(bp): 149052837

[5] gtRNAdb_ID:tRNA-Cys-GCA-10-1
Anticodon:CysGCA
tRNA_number:trna22
Chromosome:7
Strand:-
Coordinate:Start Site(bp): 149074641        End Site(bp): 149074672

[6] gtRNAdb_ID:tRNA-Cys-GCA-9-1
Anticodon:CysGCA
tRNA_number:trna6
Chromosome:3
Strand:-
Coordinate:Start Site(bp): 131950682        End Site(bp): 131950713

[7] gtRNAdb_ID:tRNA-Cys-GCA-9-3
Anticodon:CysGCA
tRNA_number:trna13
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 149332778        End Site(bp): 149332809

[8] gtRNAdb_ID:tRNA-Cys-GCA-9-4
Anticodon:CysGCA
tRNA_number:trna15
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 149404760        End Site(bp): 149404791

[9] gtRNAdb_ID:tRNA-Cys-GCA-9-2
Anticodon:CysGCA
tRNA_number:trna6
Chromosome:7
Strand:+
Coordinate:Start Site(bp): 149028220        End Site(bp): 149028251

[10] gtRNAdb_ID:tRNA-Cys-GCA-8-1
Anticodon:CysGCA
tRNA_number:trna8
Chromosome:14
Strand:+
Coordinate:Start Site(bp): 73429679        End Site(bp): 73429710



tsRNA Association Statistics

Total Associated Disease Number:1
More Information
Network:
(Display the first 15 nodes)



Disease Information

 MeSHDisease Ontology
Disease ID:D000077192DOID:3910
Disease Name:Adenocarcinoma of Lunglung adenocarcinoma
Category:MeSHDisease Ontology
Type:Neoplasmsdisease of anatomical entity//disease of cellular proliferation
Define:A carcinoma originating in the lung and the most common lung cancer type in never-smokers. Malignant cells exhibit distinct features such as glandular epithelial, or tubular morphology. Mutations in KRAS, EGFR, BRAF, and ERBB2 genes are associated with this cancer.A lung non-small cell carcinoma that derives_from epithelial cells of glandular origin.
Alias:Lung Adenocarcinomaadenocarcinoma of lung//bronchogenic lung adenocarcinoma//nonsmall cell adenocarcinoma



Disease Association Statistics

Total Associated tsRNA Number:203
More Information
Network:
(Display the first 15 nodes)



Evidence Support

Strong Evidence:N/A
Weak Evidence:High-throughput sequencing



Reference

[1] PubMed ID:35115004
Disease Name:Adenocarcinoma of Lung
Tissue:Lung glands
Dysfunction Pattern:Up-Regulation
Validated Method:High-throughput sequencing
Description:Only 155 consistent differential expression tsRNA (Co-DEtsRNAs) were detected by intersection analysis, 135 of which were up-regulated and 20 of which were down-regulated, and these were kept for further analysis.
Comparision:LUAD VS Normal
Mechanism:N/A